Protocol for DNA Purification From a Gel Slice or PCR Amplification Product
- Document # 27176
- Version 1.0.0
- Dec 2019
The following protocol is for DNA purification from an agarose gel slice or PCR amplification product using the Gel and PCR Clean-up Kit (Catalog #79030). For complete instructions, refer to the Technical Manual (Document #10000005433).
Directions
A. Sample Preparation
Prepare a gel slice or PCR amplification product as indicated below.
Gel Slice
- Following electrophoresis, excise DNA fragment from gel and place gel slice in a pre-weighed 1.7 mL microcentrifuge tube.
- Add 10 ÎĽL Membrane Binding Solution per 10 mg of gel slice. For DNA fragments > 5 kb, mix gently by inversion; for DNA fragments < 5 kb, vortex to mix. Incubate at 50 - 65ÂşC for 10 minutes or until the gel slice is completely dissolved. During incubation, mix the tube every few minutes to increase the rate of dissolution.
- Proceed to DNA purification.
PCR Amplification Product
- Add an equal volume of Membrane Binding Solution to the PCR amplification product.
- Proceed to DNA purification.
B. DNA Purification
- Insert minicolumn into Collection Tube.
- Transfer dissolved gel mixture or prepared PCR product to the minicolumn assembly. Incubate at room temperature for 1 minute.
- Centrifuge at 16,000 x g for 1 minute. Remove the minicolumn from the Collection Tube, and discard the liquid in the tube. Reinsert minicolumn in the Collection Tube.
- Add 700 ÎĽL Membrane Wash Buffer (with ethanol added). Centrifuge at 16,000 x g for 1 minute. Remove the minicolumn from the Collection Tube, and discard the liquid in the tube. Reinsert minicolumn in the Collection Tube.
- Add 500 ÎĽL Membrane Wash Buffer. Centrifuge at 16,000 x g for 5 minutes. Remove the minicolumn from the Collection Tube, and discard the liquid in the tube. Reinsert minicolumn in the Collection Tube.
- Centrifuge at 16,000 x g for 1 minute to dry membrane.
- Carefully transfer minicolumn to a clean DNase-free 1.7 mL microcentrifuge tube.
- Add 50 ÎĽL nuclease-free water to the minicolumn. Incubate at room temperature for 1 - 2 minutes.
- Centrifuge at 16,000 x g for 1 minute. Discard minicolumn and store eluted DNA at 2 - 8ÂşC or -20ÂşC.
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